Notes, summaries, assignments, exams, and problems for Biology

The Human Ear: Structure and Function

The ear is the organ that allows us to capture sound, which consists of vibrations and waves. Audition has two essential characteristics: intensity and tone. Intensity depends on the amplitude of the sound waves, and tone depends on the number of waves received per second.

Parts of the Ear

• External Ear: Includes the pinna (or auricle) and the external auditory canal. The pinna captures sound vibrations, which are then transmitted to the middle ear. The auditory canal contains ceruminous glands that produce wax for protection, hygiene, and cleanliness.
• Middle Ear: Starts with the tympanic membrane (eardrum), which vibrates upon receiving sound waves. These vibrations are transmitted to the ossicles (three small

Proteins and Gene Expression

• Activator: A DNA-binding protein that positively regulates the expression of one or more genes, i.e., the rate of transcription increases when an activator is bound to DNA. It is a positive modulator.
• Aminoacyl-tRNA Synthetase: Allosteric enzymes that catalyze the synthesis of aminoacyl-tRNA at the expense of ATP energy.
• Attenuation/Attenuator: An RNA sequence involved in the regulation of the expression of certain genes. The terminator functions in transcription.
• Inductor: A signal molecule that, when coupled with a regulatory protein, produces an increase in the expression of a particular gene.
• Leucine Zipper: A structural protein motif involved in protein-protein interactions in many eukaryotic regulatory proteins.

Animal Coordination: Nervous and Endocrine Systems

Stimuli are transmitted to focal points. Animals have two systems for coordinating information received through sensory receptors: the nervous system, which transmits electrical signals through nerves, and the endocrine system, which sends chemical signals through the blood. Both systems produce responses to stimuli that are transmitted to effector organs (muscles or glands), thereby regulating the organism's activity at all times.

The Nervous System

The nervous system is the control center and coordinating agency.

Function: To gather information from various receptors, interpret it, generate responses, and transmit these responses to other parts of the body to inform them of what action to take.... Continue reading "Animal Nervous and Endocrine Systems: Coordination Explained" »

Androecium

The androecium is the male reproductive part of a flower. It is composed of stamens, each consisting of a filament and a capsule called the anther. Inside the anther are a series of chambers called pollen sacs, where pollen grains (male gametes) are formed.

Gynoecium

The gynoecium is the female reproductive part of a plant. It consists of carpels, which are sets of fused leaves that form a cavity where the ovules reside. The carpels are called the pistil. The bottom part of the pistil is the ovary (containing the eggs), the middle part is the style, and the top part is the stigma.

Types of Pollination

• Self-Pollination

  Self-pollination occurs when pollen from the same flower or from different flowers on the same plant fertilizes the ovules.

Punctuated Equilibrium

The fossil record, while incomplete, reveals periods of stability punctuated by the sudden appearance of new species. These species often remain unchanged for extended periods before disappearing abruptly. In 1972, Gould and Eldredge proposed punctuated equilibrium to explain these sudden shifts, suggesting that not all evolutionary changes are gradual. Periods of stasis, where species remain unchanged, alternate with short bursts of rapid change (speciation), during which new species emerge from existing ones.

Gradualism vs. Punctuated Equilibrium

Gradualism

Species evolve along a single lineage, transforming slowly and continuously through small changes over long periods. The entire population transforms, not just isolated... Continue reading "Evolution: Gradualism vs. Punctuated Equilibrium" »

Prokaryotes and Eukaryotes

Prokaryotes are small, simple cells with their genetic material dispersed throughout the cytoplasm. Eukaryotes are larger, more complex cells with their genetic material contained within a structure called the nucleus, separated from the cytoplasm by a membrane called the nuclear membrane.

• Animal Cell: Found in protozoa and animals.
• Plant Cell: Found in algae and plants.

Photosynthesis

Photosynthesis is the process by which organisms synthesize energy-rich organic molecules, such as glucose, from inorganic substances lacking energy. Sunlight provides the necessary energy. Photosynthesis occurs in leaves and green stems and takes place within chloroplasts.

Formula: H₂O + CO₂ + sunlight = Mineral salts = Glucose + O₂

Cellular

Cellular Digestion: Monomers, Polymers, and Enzymes

Cells may absorb simple molecules (monomers). Monomers are scarce in nature. Typically, there are large molecules (polymers), where hundreds or thousands of simple molecules are joined together, forming foods. Digestion is a process where digestive enzymes break down the bonds between monomers, releasing free monomers. Digestive enzymes are specific to each polymer.

For example, amylase breaks down the links between glucose molecules in starch. Lipase separates fatty acids from glycerol in fats. Proteases break the links between amino acids in proteins, releasing them. The digestive system is essentially a tube. Food undergoes a series of transformations during its journey.

These actions are... Continue reading "Cellular Digestion: Monomers, Polymers, and Digestive Enzymes" »

Regulation of Gene Expression

Cells do not continuously synthesize proteins, which could result in metabolic chaos. There must be a regulation. Jacob and Monod devised a model for gene regulation in bacteria called Operon. An operon is a set of genes on the chromosome, fairly close together, that encode proteins involved in related metabolic processes. In each operon, there are two classes of genes:

• Structural genes

  (z, A) that code for the synthesis of proteins in a given process.

• Regulator gene

  (I) that codes for the synthesis of a repressor protein, which controls the expression of structural genes.

There are also two regions close to these genes whose base sequences influence regulation:

• The promoter (P)

  Next to the structural genes, this is the

The Human Heart: Anatomy and Function

The heart is an organ about the size of a fist, located in the center of the chest, slightly to the left. It is comprised of two atria and two ventricles. Blood enters the atria through the veins and is driven out of the ventricles through the arteries. The heart has valves that force the blood to circulate in one direction.

The Heartbeat

The beating of the heart is the most noticeable manifestation of its activity. The frequency with which the heart beats varies according to the body's needs. Every heartbeat follows a set of phenomena that constitute a cardiac cycle:

• Atrial systole: The atria contract and push blood into the ventricles.
• Ventricular systole: The ventricles contract, and blood leaves through